MALAYSIAN JOURNAL OF CHEMISTRY (MJChem)

MJChem is double-blind peer reviewed journal published by the Malaysian Institute of Chemistry (Institut Kimia Malaysia) E-ISSN: 2550-1658

Isolation, Characterization, Molecular Docking, and Antimalarial Activity of Chemical Constituents of Diospyros adenophora.

Ibrahim Dankane Bafarawa
Universiti Sains Malaysia
Muhammad Solehin Abd Ghani
Universiti Sains Malaysia
Mohamad Nurul Azmi
Universiti Sains Malaysia
Muhammad Bisyrul Hafi Othman
Universiti Sains Malaysia
Mohammad Nasir Ibrahim
Universiti Sains Malaysia
Mohammad Tasyriq Che Omar
Universiti Sains Malaysia
Arba Pramundita Ramadani
Universitas Islam Indonesia
Dian Nida Salsabila
Universitas Islam Indonesia
Arde Toga Nugraha
Universitas Islam Indonesia
Sista Werdyani
Universitas Islam Indonesia
Khalijah Awang
University of Malaya
Marc Litaudon
Institute de Chimie des Substances Naturelles

DOI: https://doi.org/10.55373/mjchem.v26i1.120

Keywords: Diospyros adenophora; Ebenaceae; triterpenoids; anti-malarial activity, β-hematin inhibitor

Abstract

Malaria remains the number one killer disease publicly, leading to the search for a new potent agent that fights against plasmodial falciparum. Diospyros Adenophora (Ebenaceae) is a shrub or tree grown primarily in the wet tropical biome including Peninsula Malaysia. The species of Diospyros have been reported to exhibit interesting biological properties such as antimalaria. Interestingly, no scientific report was documented on the species D. adenophora. In the present study, three known pentacyclic triterpenoids namely lupenone (1), lupeol (2), and betulin (3) were isolated from this species and fully characterized using extensive spectroscopic data like 1D- and 2D- nuclear magnetic resonance (NMR) as well as FT-IR and HRESIMS and subsequently compared with the reported literature. All compounds were screened in vitro for anti-malarial activity against β-hematin polymerization inhibition as well as molecular docking. The in vitro analysis revealed that compound 2 is the most active, with an IC50 value of 20.2 ± 17 μM, followed by compound 1 having an IC50 value of 27.5 ± 23 μM. These compounds have a lower IC50 value than chloroquine (37.5 ± 0.6 μM) as a control. Compound 3 exhibits moderate activity (IC50: 40.9 ± 22 μM) in comparison to the control. In addition, all compounds displayed high binding energy in comparison to standard chloroquine (-7.7 kcal/mol), as determined by molecular docking data. The total binding energy of lupenone (1) and betulin (3) with hemozoin crystal is -8.6 and -9.2 kcal/mol, respectively. While lupeol (2) was observed to have a high binding energy at -9.7 kcal/mol, it is considered the best binding interaction with hemozoin crystal. Based on the results obtained from in vitro β-hematin polymerization inhibition and the in-silico analysis, compounds 1 and 2 are predicted to be potential anti-malarial agents.

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Published 26 February 2024


Issue Vol 26 No 1 (2024): Malaysian Journal of Chemistry

Section