MALAYSIAN JOURNAL OF CHEMISTRY (MJChem)

MJChem is double-blind peer reviewed journal published by the Malaysian Institute of Chemistry (Institut Kimia Malaysia) E-ISSN: 2550-1658

Antibacterial Screening and Molecular Docking of 2-Chloro/ Nitrophenyl Benzimidazole Derivatives

Mar’iyah Najihah Abdullah
International Islamic University Malaysia (IIUM)
Nurul Awani Syazzira Jalil
International Islamic University Malaysia (IIUM)
Shafida Abd Hamid
International Islamic University Malaysia (IIUM)

DOI: https://doi.org/10.55373/mjchem.v25i3.505

Keywords: Benzimidazole; antibacterial; Resazurin dye; 96-well plate microdilution

Abstract

The multidrug-resistant (MDR) bacteria have increased at an alarming rate and caused serious health problems throughout the world. The lack of newly introduced antibiotics prompts researchers to design and develop efficient antimicrobials to combat this issue. Application of benzimidazole as a precursor in synthesis is one of many approaches to the discovery of new antibacterial compounds. Fifteen benzimidazole derivatives bearing chlorophenyl and nitrophenyl groups were screened using 96-well plate microdilution against eight bacteria strains; Bacillus cereus (ATCC 11778), Streptococcus pyogenes (ATCC 19615), Staphylococcus aureus (ATCC 25923) and Micrococcus luteus (IIUM), Escherichia coli (ATCC 25922), Pseudomonas aeruginosa (ATCC 27853), Klebsiella pneumonia (ATCC 700603) and Salmonella typhimurium (IMR S 974/05 B). Norfloxacin was used as a positive control, incorporated with resazurin dye to indicate bacterial growth. All compounds showed inhibition against Gram-positive and Gram-negative bacteria albeit with low activity. Molecular docking of selected compounds was also conducted to analyse their interactions with the protein targets of E.coli (PDB ID:4KFG) and S.aureus (PDB ID:4URM). Most of the synthesised compounds showed better binding affinities than norfloxacin. The solubility of the compounds in the in vitro analysis may contribute to the low antimicrobial activity results.

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Published 29 June 2023


Issue Vol 25 No 3 (2023): Malaysian Journal of Chemistry

Section